CDS

Accession Number TCMCG051C47890
gbkey CDS
Protein Id XP_002324659.2
Location join(15326423..15326782,15327126..15327308,15327420..15327512,15327742..15327894,15328198..15328289,15328760..15328901,15328981..15329088,15329320..15329405,15330200..15330271,15330373..15330499,15330601..15330687,15330922..15331014,15331564..15331722,15332111..15332194,15332282..15332362,15332448..15332530,15332630..15332747,15333204..15333467)
Gene LOC7490462
GeneID 7490462
Organism Populus trichocarpa

Protein

Length 794aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA17973
db_source XM_002324623.3
Definition isoamylase 1, chloroplastic isoform X1 [Populus trichocarpa]

EGGNOG-MAPPER Annotation

COG_category G
Description Isoamylase
KEGG_TC -
KEGG_Module M00565        [VIEW IN KEGG]
KEGG_Reaction R09995        [VIEW IN KEGG]
R11261        [VIEW IN KEGG]
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K01214        [VIEW IN KEGG]
EC 3.2.1.68        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00500        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko01110        [VIEW IN KEGG]
map00500        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map01110        [VIEW IN KEGG]
GOs GO:0000272        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004133        [VIEW IN EMBL-EBI]
GO:0004553        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005975        [VIEW IN EMBL-EBI]
GO:0005976        [VIEW IN EMBL-EBI]
GO:0005977        [VIEW IN EMBL-EBI]
GO:0005982        [VIEW IN EMBL-EBI]
GO:0005983        [VIEW IN EMBL-EBI]
GO:0006073        [VIEW IN EMBL-EBI]
GO:0006091        [VIEW IN EMBL-EBI]
GO:0006112        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009056        [VIEW IN EMBL-EBI]
GO:0009057        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009251        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010021        [VIEW IN EMBL-EBI]
GO:0010368        [VIEW IN EMBL-EBI]
GO:0015980        [VIEW IN EMBL-EBI]
GO:0016052        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016798        [VIEW IN EMBL-EBI]
GO:0019156        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0043033        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044042        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044247        [VIEW IN EMBL-EBI]
GO:0044248        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044262        [VIEW IN EMBL-EBI]
GO:0044264        [VIEW IN EMBL-EBI]
GO:0044275        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044434        [VIEW IN EMBL-EBI]
GO:0044435        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0055114        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:1901135        [VIEW IN EMBL-EBI]
GO:1901137        [VIEW IN EMBL-EBI]
GO:1901575        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:2000896        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGAACTTACTTCACTCTACTTCACACTCAGTACATGTCCTCAAATTCATTTCCCAGTTCCGAAGTACCCCAAAATTCTGTCTTTTGAAAAGAAATGTCACTTCCAATTTAGAAAACTTTGGCAGTAACCTTTTTAGTAATTCAACGGCATCGATTTCCATTAAAGCAGCAAGAGATGGGGTGGATACAGCTGTGGTGGTGGAGGAGGAGGGGCCTAAATTGAGAAAGTTTCAGGTTTTTGAAGGCCATCCTTCACCATTTGGTGCCACAGTTCGTGATGGTGGTGTCAATTTCGCTATATTTTCTGCCAATGCAGTTTCTGCTACTCTTTGCTTGATTTCTCTCTCTGATTTGCCTGAGAATAGAGTGACTGAGCAGTTTTTTCTTGATCCTTTGACCAACAAGACTGGGGATGTTTGGCATGTGCATTTGAAAGGAGATTTTAAAGATATGCTCTATGGGTACAAGTTTGATGGCAGCTTTTCTCCTGAAGAAGGACATTACTATGATCCCTCTCAGATTGTATTGGACCCGTATGCAAAAGCAGTCATTAGCAGAGGGGATTTTGGTGTTTTAGGGTCTGATGATAATTGCTGGCCTCAAATGGCCTGCATGATACCAACTGCAGATGATAAGTTTGATTGGGAGGGAGATTCACTGTTGAAGTATCCACAGAGAGATCTAATACTATATGAAATGCATGTTCGTGGGTTTACACAGCATGAATCAAGTAGGACTGAATTCCCTGGTACATACCTTGGTGTAGTGGAGAAGCTTGGTCATTTGAAGGAACTTGGTGTCAACTGCATAGAGTTAATGCCATGCCATGAATTCAATGAGCTTGAGTATTACGATTACAATTCTGTCTTCGGTGATTATAAGGTTAATTTTTGGGGGTATTCTACTGTCAATTACTTTTCTCCTATGACAAGATACTCATCTGCTGGCACACTTAACTGTGGCCATGATGCAATTAATGAATTCAAGCTTCTAGTTAGAGAAGCACATAAACGAGGAATTGAGGTGTTCATGGATGTTGTTTTCAATCACACAGCAGAAGGAAATGAGAGAGGTCCCATTCTATCTTTCAAAGGAGTTGATAATAGTGTCTATTACATGCTTGCTCCTAAGGGAGAGTTCTATAATTATTCAGGTTGTGGGAACACATTCAATTGCAACCATCCTGTCGTGCGTCAATTTATTTTGGACTGCTTAAGATATTGGGTGATTGAGATGCATGTAGATGGCTTCCGCTTTGACCTTGCTTCTATCATGACTCGAAGTAGTAGTCTCTGGGATGCAGTTAATGTTTTTGGGAGTCCAATAGAAGGCGACTTGGTGACAACTGGTACTCCTCTTGGCAGCCCACCATTGATTGAAATGATGAGTAATGATCCCATACTCCGTGATGTTAAGCTTATAGCTGAAGCATGGGATGCCGGAGGATTGTATCAAGTTGGCATGTTTCCTCATTGGCATATTTGGTCAGAATGGAATGGAAAGTATCGAGACATTGTGCGGCAGTTCATTAAGGGTACAGATGGTTTTTCTGGGGCTTTTGCTGAATGCCTTTGTGGGAGCCCAGGTTTATACCAGGAAGGAGGAAGGAAACCATGGAACAGCATTAACTTTGTATGTGCGCACGATGGTTTTACTTTGGCTGATTTAGTGACATATAACGAGAAGCATAACTTGGCAAATGGAGAAGACAACAATGATGGAGAAAATCACAACAATAGCTGGAATTGTGGACAGGAGGGTGAATTAGCCAGCATTTCAGTGAAGAAATTGCGAAAACGGCAAATGCGAAATTTCTTTCTGTGTCTTATGGTTTCTCAAGGTGTTCCAATGATACACATGGGTGATGAATATGGTCACACAAAAGGGGGCAACAACAATACATATTGCCATGACAACTATATCAACTATTTCTGGTGGGATAAGAAGGAAGAATCCTCATCAGACTTCTTTAGATTTTGCCGCCTCATGACCAAGTTCCGCCATGAATGTGAGTCCCTTGGCTTGAATGACTTCCCAACAGCAGAGAGGCTGCAATGGCATGGTCATGCTCCTGGAACACCAGATTGGTCAGAAACAAGCCGTTTTGTGGCCTTTACACTGATTGACTCGGTGAAGCGCGAGATCTACATCGCCTTCAATGCTAGCCATTTGTCAGTTACCATCACACTCCCAGAACGGCCAGCATACAGATGGGAGCCCCTGGTAGACACTGGCAAGCCTGCACCATTCGATTTCCTTTCTGGTGACTTACCTGAAAGGGACACAGCAATGAAACAGTATTCTCACTTCCTGGAGGCCAATCTGTATCCTATGCTCAGTTATTCTTCTATCATCCTCGTACTCTTGCCCGTCGACAATGCTTAG
Protein:  
MNLLHSTSHSVHVLKFISQFRSTPKFCLLKRNVTSNLENFGSNLFSNSTASISIKAARDGVDTAVVVEEEGPKLRKFQVFEGHPSPFGATVRDGGVNFAIFSANAVSATLCLISLSDLPENRVTEQFFLDPLTNKTGDVWHVHLKGDFKDMLYGYKFDGSFSPEEGHYYDPSQIVLDPYAKAVISRGDFGVLGSDDNCWPQMACMIPTADDKFDWEGDSLLKYPQRDLILYEMHVRGFTQHESSRTEFPGTYLGVVEKLGHLKELGVNCIELMPCHEFNELEYYDYNSVFGDYKVNFWGYSTVNYFSPMTRYSSAGTLNCGHDAINEFKLLVREAHKRGIEVFMDVVFNHTAEGNERGPILSFKGVDNSVYYMLAPKGEFYNYSGCGNTFNCNHPVVRQFILDCLRYWVIEMHVDGFRFDLASIMTRSSSLWDAVNVFGSPIEGDLVTTGTPLGSPPLIEMMSNDPILRDVKLIAEAWDAGGLYQVGMFPHWHIWSEWNGKYRDIVRQFIKGTDGFSGAFAECLCGSPGLYQEGGRKPWNSINFVCAHDGFTLADLVTYNEKHNLANGEDNNDGENHNNSWNCGQEGELASISVKKLRKRQMRNFFLCLMVSQGVPMIHMGDEYGHTKGGNNNTYCHDNYINYFWWDKKEESSSDFFRFCRLMTKFRHECESLGLNDFPTAERLQWHGHAPGTPDWSETSRFVAFTLIDSVKREIYIAFNASHLSVTITLPERPAYRWEPLVDTGKPAPFDFLSGDLPERDTAMKQYSHFLEANLYPMLSYSSIILVLLPVDNA